Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THYM rs4952133 chr2:30712281 C/T 1.45E-8 118 38.33 50.07 33.13 KM Plot
THYM rs4952135 chr2:30731431 C/T 1.83E-8 117 36.4 50.1 33.13 KM Plot
THYM rs4952136 chr2:30731457 A/T 1.4E-8 118 37.37 50.1 33.13 KM Plot
THYM rs4952137 chr2:30731483 G/C 2.24E-8 116 36.4 50.07 33.13 KM Plot
THYM rs4952139 chr2:30742711 C/T 1.47E-8 118 38.58 48.33 33.13 KM Plot
THYM rs4952141 chr2:30751190 C/T 1.86E-8 117 36.4 50.1 33.13 KM Plot
THYM rs4952142 chr2:30759917 A/G 1.33E-8 119 36.4 50.1 33.13 KM Plot
THYM rs4952145 chr2:30770859 A/G 1.33E-8 119 36.4 50.1 33.13 KM Plot
THYM rs4952146 chr2:30773930 G/C 1.33E-8 119 36.4 50.1 33.13 KM Plot
THYM rs4952148 chr2:30777908 T/G 3.25E-7 119 38.33 46.6 13.23 KM Plot
THYM rs4952149 chr2:30781620 T/C 1.33E-8 119 36.4 50.1 33.13 KM Plot
THYM rs4952150 chr2:30789229 C/T 1.33E-8 119 36.4 50.1 33.13 KM Plot
THYM rs4952151 chr2:30796668 A/G 2.24E-8 117 36.03 50.07 33.13 KM Plot
THYM rs4952152 chr2:30797350 A/G 1.33E-8 119 33.13 50.1 36.4 KM Plot
THYM rs4952154 chr2:30809843 T/C 1.33E-8 119 36.4 50.1 33.13 KM Plot